高级检索
当前位置: 首页 > 详情页

Identification of BIK as an unfavorable prognostic marker and novel therapeutic target in microsatellite stable colorectal cancer harboring KRAS mutations

| 认领 | 导出 |

文献详情

资源类型:
WOS体系:

收录情况: ◇ SCIE ◇ 预警期刊

单位: [1]Naval Med Univ, Changhai Hosp, Dept Colorectal Surg, Shanghai, Peoples R China [2]Shanghai Jiao Tong Univ, Renji Hosp, Sch Med, Dept Oncol, Shanghai, Peoples R China [3]Fudan Univ, Jingan Dist Ctr Hosp Shanghai, Dept Oncol, Jingan Branch,Huashan Hosp, Shanghai, Peoples R China [4]3D Med Inc, Med Affairs, Shanghai, Peoples R China [5]China Japan Friendship Hosp, Dept Gastrointestinal Surg, Beijing 100029, Peoples R China [6]Nanjing Univ Chinese Med, Nanjing Hosp Chinese Med, Dept Oncol, 157 Daming Rd, Nanjing 210023, Jiangsu, Peoples R China
出处:
ISSN:

关键词: Colorectal cancer KRAS mutations microsatellite stable KRAS function -sensitive genes BIK

摘要:
KRAS mutations lead to persistent activation of multiple downstream effectors that drive the cancer phenotype. Approximately 30%-50% of colorectal cancer (CRC) patients harbor KRAS mutations, which confer more aggressive tumor biology and shorter overall survival (OS), especially in microsatellite stable (MSS) metastatic CRC. Given that KRAS mutant protein has been proven difficult to target directly, identifying genes that function closely with KRAS and targeting these genes seems to be a promising therapeutic strategy for KRAS-mutated MSS CRC. Here, KRAS function-sensitive genes were identified by assessing the correlation between gene dependency scores from CRISPR knockout screens and KRAS mRNA expression in KRAS-mutated MSS CRC cell lines in the Cancer Cell Line Encyclopedia (CCLE) database. If the correlation coefficient was & GE; 0.6, the gene was considered a KRAS function -sensitive gene. Then KRAS function-sensitive genes related to prognosis were screened out in The Cancer Genome Atlas (TCGA) cohort, and the prognostic value was validated in the Gene Expression Omnibus (GEO) cohort. Single -sample gene set enrichment analysis (ssGSEA) was performed to investigate the potential mechanisms. PockDrug-Server was used to predict the druggability of candidate genes. The results showed that in 20 KRAS-mutated MSS CRC cell lines, 13 genes were identified as KRAS function-sensitive genes. Of these 13 genes, only BIK expression was significantly associated with progression-free survival (PFS) and OS, and the BIK-high patients had significantly poorer PFS (HR=3.18, P=0.020) and OS (HR=4.74, P=0.030) than the BIK-low patients. Multivariate Cox regression analysis revealed high BIK expression as an independent predictor for poorer prognosis in KRAS-mutated MSS CRC. The prognostic value of BIK was also successfully validated in a GEO cohort. The results of ssGSEA showed that the BIK-high group was more prone to strong metastasis activity than the BIK-low group. Pocket druggability prediction analysis presented that BIK had three druggable pockets, and their druggability scores were above 0.8. These find-ings suggested that BIK is a promising prognostic marker and therapeutic target in KRAS-mutated MSS CRC.

基金:
语种:
WOS:
中科院(CAS)分区:
出版当年[2021]版:
大类 | 3 区 医学
小类 | 3 区 肿瘤学
最新[2025]版:
大类 | 3 区 医学
小类 | 4 区 肿瘤学
JCR分区:
出版当年[2020]版:
Q2 ONCOLOGY
最新[2023]版:
Q2 ONCOLOGY

影响因子: 最新[2023版] 最新五年平均[2021-2025] 出版当年[2020版] 出版当年五年平均[2016-2020] 出版前一年[2019版] 出版后一年[2021版]

第一作者:
第一作者单位: [1]Naval Med Univ, Changhai Hosp, Dept Colorectal Surg, Shanghai, Peoples R China
共同第一作者:
通讯作者:
通讯机构: [5]China Japan Friendship Hosp, Dept Gastrointestinal Surg, Beijing 100029, Peoples R China [6]Nanjing Univ Chinese Med, Nanjing Hosp Chinese Med, Dept Oncol, 157 Daming Rd, Nanjing 210023, Jiangsu, Peoples R China [*1]Department of Gastrointestinal Surgery, China-Japan Friendship Hospital, Yinghua Donglu, Heping Jie, Chaoyang District, Beijing 100029, China. [*2]Department of Oncology, Nanjing Hospital of Chinese Medicine Affiliated to Nanjing University of Chinese Medicine, No. 157, Daming Road, Qinhuai District, Nanjing 210023, Jiangsu, China
推荐引用方式(GB/T 7714):
APA:
MLA:

资源点击量:1320 今日访问量:0 总访问量:817 更新日期:2025-05-01 建议使用谷歌、火狐浏览器 常见问题

版权所有:重庆聚合科技有限公司 渝ICP备12007440号-3 地址:重庆市两江新区泰山大道西段8号坤恩国际商务中心16层(401121)