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Analytic and Clinical Validation of an Ultrasensitive, Quantitative Polymerase Chain Reaction Assay for EGFR Mutation Analysis With Circulating Tumor DNA

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单位: [1]Departments of Thoracic Surgery [2]Departments of Pathology,China-Japan Friendship Hospital, Beijing, China [3]National Institute of Metrology, Beijing [4]Beijing ACCB Biotech Ltd, Beijing [5]Department of Biotechnology and Pharmaceutical Research, Yangze Delta Institute of Tsinghua University, Zhejiang, China.
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Context.-The mutation analysis of epidermal growth factor receptor (EGFR) has become a common test to guide therapeutic decision making for lung cancer. Molecular testing with circulating tumor DNA in plasma allows diagnosis of mutations when tumor tissue is not available as well as monitoring treatment response with repeat biopsies. Objectives.-To develop a timely and cost-effective assay that can accurately detect EGFR mutations in circulating tumor DNA and to evaluate the analytic and clinical performance of the assay. Design.-Analytic assessment was conducted with a set of reference materials carrying classic EGFR mutations. A recently developed Poisson distribution-based approach was employed to understand the assay sensitivity. Clinical evaluation was performed with 224 pairs of plasma and matched tissues from patients with stage I to IV disease. EGFR mutation rates of 390 consecutive plasma samples processed in the central service laboratory were compared with previously reported prevalence in an Asian population. Results.-Our results suggested that limit of detection for the EGFR quantitative polymerase chain reaction assay was 10 mutation copies, and the lowest detectable copy numbers could be extended to a single-digit level. The clinical sensitivity was 53.3% for all stages combined and 81.4% for late stages, with a high specificity of 100%. Clinical observations showed an overall positive finding rate of 32.5% and 41.4% for stage IV disease, which is consistent with previously reported EGFR mutation prevalence in an Asian population. Conclusions.-Our results supported the clinical utility of the ultrasensitive, quantitative polymerase chain reaction assay for EGFR mutation analysis with circulating tumor DNA.

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出版当年[2016]版:
大类 | 3 区 医学
小类 | 2 区 医学实验技术 3 区 医学:研究与实验 3 区 病理学
最新[2025]版:
大类 | 3 区 医学
小类 | 2 区 医学实验技术 2 区 病理学 3 区 医学:研究与实验
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出版当年[2015]版:
Q2 PATHOLOGY Q2 MEDICINE, RESEARCH & EXPERIMENTAL Q2 MEDICAL LABORATORY TECHNOLOGY
最新[2023]版:
Q1 PATHOLOGY Q2 MEDICAL LABORATORY TECHNOLOGY Q2 MEDICINE, RESEARCH & EXPERIMENTAL

影响因子: 最新[2023版] 最新五年平均[2021-2025] 出版当年[2015版] 出版当年五年平均[2011-2015] 出版前一年[2014版] 出版后一年[2016版]

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第一作者单位: [1]Departments of Thoracic Surgery
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通讯机构: [1]Departments of Thoracic Surgery [*1]Department of Thoracic Surgery, China-Japan Friendship Hospital, Beijing 100029, China
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