Analytic and Clinical Validation of an Ultrasensitive, Quantitative Polymerase Chain Reaction Assay for EGFR Mutation Analysis With Circulating Tumor DNA
单位:[1]Departments of Thoracic Surgery[2]Departments of Pathology,China-Japan Friendship Hospital, Beijing, China[3]National Institute of Metrology, Beijing[4]Beijing ACCB Biotech Ltd, Beijing[5]Department of Biotechnology and Pharmaceutical Research, Yangze Delta Institute of Tsinghua University, Zhejiang, China.
Context.-The mutation analysis of epidermal growth factor receptor (EGFR) has become a common test to guide therapeutic decision making for lung cancer. Molecular testing with circulating tumor DNA in plasma allows diagnosis of mutations when tumor tissue is not available as well as monitoring treatment response with repeat biopsies. Objectives.-To develop a timely and cost-effective assay that can accurately detect EGFR mutations in circulating tumor DNA and to evaluate the analytic and clinical performance of the assay. Design.-Analytic assessment was conducted with a set of reference materials carrying classic EGFR mutations. A recently developed Poisson distribution-based approach was employed to understand the assay sensitivity. Clinical evaluation was performed with 224 pairs of plasma and matched tissues from patients with stage I to IV disease. EGFR mutation rates of 390 consecutive plasma samples processed in the central service laboratory were compared with previously reported prevalence in an Asian population. Results.-Our results suggested that limit of detection for the EGFR quantitative polymerase chain reaction assay was 10 mutation copies, and the lowest detectable copy numbers could be extended to a single-digit level. The clinical sensitivity was 53.3% for all stages combined and 81.4% for late stages, with a high specificity of 100%. Clinical observations showed an overall positive finding rate of 32.5% and 41.4% for stage IV disease, which is consistent with previously reported EGFR mutation prevalence in an Asian population. Conclusions.-Our results supported the clinical utility of the ultrasensitive, quantitative polymerase chain reaction assay for EGFR mutation analysis with circulating tumor DNA.
基金:
National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [81302026]; China-Japan Friendship Hospital Youth Science and Technology Excellence Project [2014-QNYC-B-08]; Fundamental Research Funds for the central public welfare research institutes [32-AKY1311]; Project of Disciplines Construction of State Key Clinical Department [[2011] 873]; Zhejiang Provincial Natural Science Foundation of ChinaNatural Science Foundation of Zhejiang Province [LY15H160048]; Beijing ACCB Biotech Ltd.
语种:
外文
被引次数:
WOS:
中科院(CAS)分区:
出版当年[2016]版:
大类|3 区医学
小类|2 区医学实验技术3 区医学:研究与实验3 区病理学
最新[2025]版:
大类|3 区医学
小类|2 区医学实验技术2 区病理学3 区医学:研究与实验
JCR分区:
出版当年[2015]版:
Q2PATHOLOGYQ2MEDICINE, RESEARCH & EXPERIMENTALQ2MEDICAL LABORATORY TECHNOLOGY
最新[2023]版:
Q1PATHOLOGYQ2MEDICAL LABORATORY TECHNOLOGYQ2MEDICINE, RESEARCH & EXPERIMENTAL
通讯机构:[1]Departments of Thoracic Surgery[*1]Department of Thoracic Surgery, China-Japan Friendship Hospital, Beijing 100029, China
推荐引用方式(GB/T 7714):
Wang Xiaowei,Gao Yunhua,Wang Bei,et al.Analytic and Clinical Validation of an Ultrasensitive, Quantitative Polymerase Chain Reaction Assay for EGFR Mutation Analysis With Circulating Tumor DNA[J].ARCHIVES of PATHOLOGY & LABORATORY MEDICINE.2017,141(7):978-984.doi:10.5858/arpa.2016-0083-OA.
APA:
Wang, Xiaowei,Gao, Yunhua,Wang, Bei,Zhang, Zhenrong,Liang, Chaoyang...&Liu, Deruo.(2017).Analytic and Clinical Validation of an Ultrasensitive, Quantitative Polymerase Chain Reaction Assay for EGFR Mutation Analysis With Circulating Tumor DNA.ARCHIVES of PATHOLOGY & LABORATORY MEDICINE,141,(7)
MLA:
Wang, Xiaowei,et al."Analytic and Clinical Validation of an Ultrasensitive, Quantitative Polymerase Chain Reaction Assay for EGFR Mutation Analysis With Circulating Tumor DNA".ARCHIVES of PATHOLOGY & LABORATORY MEDICINE 141..7(2017):978-984