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Genetic Characterization of bla(NDM-1)-Carrying Citrobacter portucalensis Sequence Type 328 and Citrobacter freundii Sequence Type 98

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单位: [1]Tsinghua Univ, Beijing Tsinghua Changgung Hosp, Sch Clin Med, Dept Clin Lab, Beijing 102218, Peoples R China [2]China Japan Friendship Hosp, Dept Pulm & Crit Care Med, Lab Clin Microbiol & Infect Dis, Beijing 100029, Peoples R China [3]Qitan Technol Ltd, Chengdu 610044, Sichuan, Peoples R China [4]Tsinghua Univ, Beijing Tsinghua Changgung Hosp, Sch Clin Med, Dept Geriatr, Beijing 102218, Peoples R China
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关键词: NDM-1 Citrobacter portucalensis Citrobacter freundii whole-genome sequencing

摘要:
Purpose: NDM-1-producing Citrobacter portucalensis and Citrobacter freundii simultaneously occurred in a hospital. This study aims to characterize the bla(NDM-1)-carrying plasmids in these Citrobacter strains. Methods: Cf7303, Cf7308, and Cf7313 were recovered from three patients in a teaching hospital from September 24 to October 1, 2021. Bacteria were identified by MALDI-TOF mass spectrometry, and antibiotics susceptibility tests were determined by VITEK (R) 2 compact system. Whole-genome sequencing (WGS) was performed using the HiSeq Illumina and QNome platform to characterize the genomes. Results: Cf7303 was identified as C. portucalensis Sequence Type 328 by WGS, and harbored two plasmids, namely pCf7303 and a novel lncFIB pNDM-Cf7303 on which antibiotic-resistant genes (bla(TEM-1), bla(CTX-M-14), bla(NDM-1), aac (3)-IId, aadA2, fosA3, sul1, sul2, catA2, tetD, dfrAl2, qacEdeltal, mph(A), and ble(MBL)) are located. C. freundii strain Cf7308 and Cf7313 belonged to the same Sequence Type 98. Cf7308 contained two plasmids, pCf7308, and an lncN1 pNDM-Cf7308 with homology to pNDM-BTR in E. coli and pNDM-CWHOO1 in C. freundii. Conclusion: We characterized a putatively novel lncFIB plasmid carrying bla(NDM-1) in C. portucalensis. In addition, the closely related bla(NDM-1)-carrying lncN1 plasmids in E. coli and C. freundii suggest that interspecies or intraspecies horizontal transfer occurs in China.

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出版当年[2021]版:
大类 | 3 区 医学
小类 | 3 区 传染病学 3 区 药学
最新[2025]版:
大类 | 3 区 医学
小类 | 3 区 药学 4 区 传染病学
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出版当年[2020]版:
Q2 INFECTIOUS DISEASES Q2 PHARMACOLOGY & PHARMACY
最新[2023]版:
Q2 INFECTIOUS DISEASES Q2 PHARMACOLOGY & PHARMACY

影响因子: 最新[2023版] 最新五年平均[2021-2025] 出版当年[2020版] 出版当年五年平均[2016-2020] 出版前一年[2019版] 出版后一年[2021版]

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第一作者单位: [1]Tsinghua Univ, Beijing Tsinghua Changgung Hosp, Sch Clin Med, Dept Clin Lab, Beijing 102218, Peoples R China
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通讯机构: [1]Tsinghua Univ, Beijing Tsinghua Changgung Hosp, Sch Clin Med, Dept Clin Lab, Beijing 102218, Peoples R China [4]Tsinghua Univ, Beijing Tsinghua Changgung Hosp, Sch Clin Med, Dept Geriatr, Beijing 102218, Peoples R China [*1]Department of Geriatrics, Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua University, Beijing, 102218, People’s Republic of China [*2]Department of Clinical Laboratory, Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua University, Beijing, 102218, People’s Republic of China
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