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Deep targeted sequencing reveals the diversity of TRB-CDR3 repertoire in patients with preeclampsia

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单位: [1]Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China [2]Graduate School of Peking Union Medical College, Beijing 100730, China [3]Laboratory of Human Genetics, Beijing Hypertension League Institute, Beijing 100043, China [4]Stanford Genome Technology Center, Stanford University, Palo Alto CA 94003, USA [5]HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA [6]The First Affiliated Hospital, Medical College of Shantou University, Shantou, Guangdong 515041, China [7]Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China [8]Beijing Obstetrics and Gynecology Hospital, Capital Medical University, Beijing Maternal and Child Health Care Hospital, Beijing 100026, China
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关键词: Preeclampsia Immunological characteristics High-throughput sequencing TRB-CDR3 repertoire The pathogenesis of PE

摘要:
Preeclampsia (PE) is one of the major causes of maternal and perinatal mortality worldwide. This study aimed to determine the immunological characteristics of PE patients and normal pregnancy at the T cell receptor betachain (TRB) level by using high-throughput sequencing. High-throughput sequencing was performed to analyze the expression of TRB-CDR3 in circulating T cells. T cells were isolated from 36 healthy pregnant women, 24 patients with severe PE, and 18 patients with moderate PE. Rearranged mRNA sequences were assigned to their germline V, D, and J counterparts, and translated into proper amino acids by the IMGT database. In general, PE samples had more TRB-CDR3 reads and types than those of normal pregnant woman in the circulation, but the mean number of TRB-CDR3 reads and unique TRB-CDR3 reads in severe group was lower than that in the moderate group. In PE patients, the V7_9 and V20_1 gene loci were more prevalent than in healthy pregnant women. In addition, 4 kinds of TRB-CDR3 peptides were found to be highly relevant to the pathogenesis of PE. Of them, peptides matched to herpes simplex virus antigen-specific T cells were much lower in PE samples.

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出版当年[2018]版:
大类 | 4 区 医学
小类 | 4 区 免疫学
最新[2025]版:
大类 | 4 区 医学
小类 | 4 区 免疫学
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出版当年[2017]版:
Q4 IMMUNOLOGY
最新[2023]版:
Q3 IMMUNOLOGY

影响因子: 最新[2023版] 最新五年平均[2021-2025] 出版当年[2017版] 出版当年五年平均[2013-2017] 出版前一年[2016版] 出版后一年[2018版]

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第一作者单位: [1]Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China
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通讯机构: [1]Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China [2]Graduate School of Peking Union Medical College, Beijing 100730, China [3]Laboratory of Human Genetics, Beijing Hypertension League Institute, Beijing 100043, China [4]Stanford Genome Technology Center, Stanford University, Palo Alto CA 94003, USA [*1]Graduate School of Peking Union Medical College, Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
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